Utils

Project root

Returns:

Name	Type	Description
`str`	`Path`	Path to the root of the project.

Sets the numpy and torch seeds.

Parameters:

Name	Type	Description	Default
`k`		seed.	required

Function to plot the time evolution of the state of a cell.

Parameters:

Name	Type	Description	Default
`trajectory`	`torch.Tensor`	States of the cell observed at the different time points. Shape (n_time_points, 1, n_genes).	required
`time_points`	`list or 1D numpy.array`	Times of the observations.	`None`
`legend`	`bool`	Whether to add a legend to the plot.	`True`

Raises:

Type	Description
`RuntimeWarning`	If the trajectory contains more than one cell. Only the trajectory of the first cell is plotted.